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This website will eventually house and link to all of the databases and resources developed by the International Aphid Genomics Consortium (IAGC). We will also endeavour to maintain links to additional resources for the study of aphid genomics. At the moment you can access pea aphid genomic data through the resources listed below. Sign up for the AphidGenomics List Server to keep up to date on Aphid Genomics |
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News
15 July
2008 6 June 2008 21 May 2008 10 Jan.
2008 17 Dec.
2007 10 Dec.
2007 21 Nov.
2007 13 Nov.
2007 |
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| PLEASE
READ THE IAGC POLICY ON
PREPUBLICATION DATA ACCESS BEFORE USING THESE RESOURCES |
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| Genome Project Sites | |
| The NCBI pea aphid genome project resource page | |
| HGSC BCM pea aphid genome project resource page | |
| Genome Browsers |
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| GBROWSE
of genome assembly v. 1.0 at INRA Aphidbase |
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| EST databases | |
| EST database at The University of York - Includes pre-compiled BLAST hits and GO identifiers | |
| BLAST service and aphid ESTs mapped to Drosophila genome | |
| BLAST >94,000 aphid ESTs at NCBI | |
| Genomic DNA databases | |
| Aphidbase BLAST gDNA traces aphid ESTs, and v. 1.0 assembly contigs and scaffolds (blastn, tblastn, tblastx) | |
| BLAST gDNA traces at Baylor College of Medicine (blastn, tblastn) | |
| Endosymbiont Genomic Resources | |
| Integrated Buchnera Genome Database - University of Tokyo & RIKEN | |
| Buchnerabase - Genomic database for Buchnera aphidicola - University of York | |
| Other Genomic Resources | |
| Pea aphid BAC Library - BAC Library used for the genome project from Amemiya lab. Library construction funded by NIH. | |
| Pea aphid
stocks available from Moran lab |
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| Genome Annotators Resources | |
| Annotators
database - Look here for annotator and annotation group information
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Log in as Guest |
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| Aphid genome annotators meeting | |
| Genome Consortium
Collaboration WIKI |
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Last Update: 16
July, 2008
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