Genome
|
FTP from rom Baylor College (fasta)
Scaffolds sizes and accessions (txt) |
|
| |
|
Official genes consensus set
|
ACYPproteins (fasta, gff)
ACYPmRNA (fasta, gff)
ACYPI all (gff) |
|
| |
|
Other genes prediction sets
|
RefSeq genes (fasta , gff)
RefSeq mRNA (fasta)
RefSeq proteins (fasta)
Gnomon genes part1 (fasta)
Gnomon genes part2 (fasta)
Gnomon mRNA (fasta) |
Gnomon proteins (fasta)
Maker (gff)
GeneID (gff)
Augustus (gff)
Genscan (gff)
Snap (gff) |
| |
|
cDNAs
|
A. pisum ESt part 1 (gff)
A. pisum ESt part 2 (gff) |
|
| |
|
EST and 454 data from other species
|
|
Myzus454(fasta)
MyzusSanger(fasta)
Toxoptera citricida contigs (fasta)
Aphis gossypii contigs (fasta)
Myzus persicae contigs (fasta)
Toxoptera citricida CDS (fasta)
Aphis gossypii CDS (fasta)
Myzus persicae CDS (fasta)
|
|
| |
|
Transposable Elements
|
|
| REPET predictions (fasta, gff) |
|
| |
|
Gene Ontology
|
|
| Blast2GO predictions (Blast2GO results) |
|
| |
|
Others
|
|
| Scaffolds sizes and accessions (txt) |
|
* gff files are as loaded in AphidBase |
|
Writing:
jpg
Creation date: 20 November 2008
Update: 08 July 2010
